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MOLECULAR BIOLOGY: WORKING WITH DNA

ANTIBODIES: ANTIGEN PREPARATION

Cyanogen Bromide Activation of Sepharose and Preparation of Heparin-Sepharose (CL2B or CL6B)

Cyanogen Bromide Activation of Sepharose and Preparation of Heparin-Sepharose (CL2B or CL6B)
 
Procedure
1. Wash a 250 ml volume of settled bed Sepharose resin with 2 liters of ddH2O in a 600 ml scintered glass funnel using a 2 liter side arm flask under a modest vacuum. Do NOT let the bed resin run dry.

2. Transfer the resin to a 2 liter glass beaker using a large spatula and resuspend the resin in 750 ml 4°C ddH2O. Add a large magnetic stir bar to the beaker and place it into an ice bucket so that ice surrounds the sides of the beaker. It is convenient to cover the beaker with plastic wrap using a rubber band to secure the plastic wrap to prevent ice getting into the resin.

3. CAUTION!! (see Hint #1) To resuspend 25 g of cyanogen bromide in 50 ml dimethyl formamide (DMF), first add a small stir bar and about 10 to 15 ml DMF to the bottle of cyanogen bromide and then start the solution stirring on a stir plate in a fume hood. Then transfer the cyanogen bromide liquid to a beaker and rinse the bottle with fresh DMF and pool into a beaker with stirring.

4. Add the cyanogen bromide liquid to the Sepharose (on ice in a fume hood) slowly with stirring using a disposable 10 ml glass pipet. Using 5 M NaOH, keep the pH of the reaction between pH 10.5 and 11.5 for 1 hr. This will require about 100 ml 5 M NaOH per 250 ml Sepharose. Check the pH with pH strips.

5. Wash the cyanogen bromide-activated Sepharose with 4 liters of 4°C ddH2O on a 600 ml scintered glass funnel under a modest vacuum. Do NOT let the bed resin run dry. Dispose of filtrate and first wash in appropriate waste.

6. Transfer the cyanogen bromide-activated Sepharose with a large spatula to 750 ml 4°C 0.1 M NaHCO3 containing 3 g (500,000 Units) of the sodium salt of heparin (see Hint #2).

7. Stir slowly overnight (12 to 18 hr) at 4°C (in a cold room).

8. Add 30 ml triethylamine and stir for 4 hr at 4°C.

9. Wash the resin on a 600 ml scintered glass funnel with 1.5 liters of ddH2O

10. Wash the resin on the scintered glass funnel with 1.5 liters of TEN.

11. Transfer the resin to a 500 ml wide mouth polypropylene bottle and fill it with TEN Azide. Store at 4°C.

Solutions
0.1 M Sodium Bicarbonate   0.1 M Sodium Bicarbonate (NaHCO3)
TEN Azide   0.02% (w/v) Sodium Azide
0.02% (w/v) Sodium Azide (NaN3, CAUTION! see Hint #1)
1 mM EDTA
300 mM NaCl
10 mM Tris-HCl, pH 7.5
TEN   0.3 M NaCl
1 mM EDTA
10 mM Tris-HCl, pH 7.5
5 M NaOH
 
BioReagents and Chemicals
Sodium Hydroxide
Tris
EDTA
Sodium Bicarbonate
Triethylamine
Dimethyl Formamide (DMF)
Cyanogen Bromide
Sodium Azide
Sepharose CL6B
Heparin Sodium Salt
Sepharose CL2B
Tris-HCl
Sodium Chloride
 
Protocol Hints
1. CAUTION! This substance is a biohazard. Consult this agent's MSDS for proper handling instructions.

2. Ligands other than heparin can be coupled to the activated Sepharose resin.

 
Citation and/or Web Resources
1. Farooqui AA. Purification of enzymes by heparin-sepharose affinity chromatography. J Chromatography 1980; 184:335-45